Installation

Stable release

To install wsipipe, run this command in your terminal:

$ pip install wsipipe

This is the preferred method to install wsipipe, as it will always install the most recent stable release.

If you don’t have pip installed, this Python installation guide can guide you through the process.

From sources

The sources for wsipipe can be downloaded from the Github repo.

You can either clone the public repository:

$ git clone git://github.com/StAndrewsMedTech/wsipipe

Or download the tarball:

$ curl -OJL https://github.com/StAndrewsMedTech/wsipipe/tarball/master

Once you have a copy of the source, you can install it with:

$ python setup.py install

Openslide

Wsipipe requires openslide this cannot be installed by pip. Please follow the instructions on https://openslide.org/api/python/ for your operating system.

for example on ubuntu:

apt install -y openslide-tools